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| Variant Type | Calling Status |
|---|---|
| Mutations | Called |
| Copy number | Called |
| Fusions | Called |
| Gene | Somatic Mutations | Classification | Type | VAF | Somatic Copy Number | CN status | Fusions |
|---|---|---|---|---|---|---|---|
| A4GNT | - | - | - | - | 3 | Gain | - |
| AADAC | - | - | - | - | 3 | Gain | - |
| AADACL2 | - | - | - | - | 3 | Gain | - |
| ABCA4 | p.E2046K | Missense | SNP | 0.410 | 2 | - | - |
| ABCC5 | - | - | - | - | 3 | Gain | - |
| ABCF3 | - | - | - | - | 3 | Gain | - |
| ABI1 | - | - | - | - | 1 | Loss | - |
| ABTB1 | - | - | - | - | 3 | Gain | - |
| AC020636.2 | - | - | - | - | 3 | Gain | - |
| AC026316.5 | - | - | - | - | 3 | Gain | - |
| AC068631.2 | - | - | - | - | 3 | Gain | - |
| AC069257.3 | - | - | - | - | 3 | Gain | - |
| AC069444.2 | - | - | - | - | 3 | Gain | - |
| AC079594.2 | - | - | - | - | 3 | Gain | - |
| AC083800.1 | - | - | - | - | 3 | Gain | - |
| AC104472.3 | - | - | - | - | 3 | Gain | - |
| AC112504.2 | - | - | - | - | 3 | Gain | - |
| AC117457.1 | - | - | - | - | 3 | Gain | - |
| AC131160.1 | - | - | - | - | 3 | Gain | - |
| ACAD11 | - | - | - | - | 3 | Gain | - |
| ACAD9 | - | - | - | - | 3 | Gain | - |
| ACAP1 | p.E516D | Missense | SNP | 0.407 | 2 | - | - |
| ACAP2 | - | - | - | - | 3 | Gain | - |
| ACBD5 | - | - | - | - | 1 | Loss | - |
| ACBD7 | - | - | - | - | 1 | Loss | - |
| ACKR4 | - | - | - | - | 3 | Gain | - |
| ACPP | - | - | - | - | 3 | Gain | - |
| ACTL6A | - | - | - | - | 3 | Gain | - |
| ACTRT3 | - | - | - | - | 3 | Gain | - |
| ADARB2 | - | - | - | - | 1 | Loss | - |
| ADCY5 | - | - | - | - | 3 | Gain | - |
| ADIPOQ | - | - | - | - | 3 | Gain | - |
| ADPRH | - | - | - | - | 3 | Gain | - |
| ADPRHL1 | - | - | - | - | 3 | Gain | - |
| AGO4 | p.D457Y | Missense | SNP | 0.433 | 2 | - | - |
| AGTR1 | - | - | - | - | 3 | Gain | - |
| AHNAK | p.E5254Q | Missense | SNP | 0.571 | 2 | - | - |
| AHSG | - | - | - | - | 3 | Gain | - |
| AKR1C1 | - | - | - | - | 1 | Loss | - |
| AKR1C2 | - | - | - | - | 1 | Loss | - |
| AKR1C3 | - | - | - | - | 1 | Loss | - |
| AKR1C4 | - | - | - | - | 1 | Loss | - |
| AKR1C8P | - | - | - | - | 1 | Loss | - |
| AKR1E2 | - | - | - | - | 1 | Loss | - |
| AL117339.5 | - | - | - | - | 1 | Loss | - |
| AL157392.5 | - | - | - | - | 1 | Loss | - |
| ALDH1L1 | - | - | - | - | 3 | Gain | - |
| ALG1L | - | - | - | - | 3 | Gain | - |
| ALG1L2 | - | - | - | - | 3 | Gain | - |
| ALG3 | - | - | - | - | 3 | Gain | - |
| AMIGO2 | p.R465T | Missense | SNP | 0.473 | 2 | - | - |
| AMOTL2 | - | - | - | - | 3 | Gain | - |
| ANAPC13 | - | - | - | - | 3 | Gain | - |
| ANHX | p.R67H | Missense | SNP | 0.509 | 2 | - | - |
| ANKFY1 | p.L203V | Missense | SNP | 0.425 | 2 | - | - |
| ANKRD10 | - | - | - | - | 3 | Gain | - |
| ANKRD16 | - | - | - | - | 1 | Loss | - |
| ANKRD26 | - | - | - | - | 1 | Loss | - |
| ANKRD30A | - | - | - | - | 1 | Loss | - |
| ANKS6 | p.S854Y | Missense | SNP | 0.459 | 2 | - | - |
| ANKUB1 | - | - | - | - | 3 | Gain | - |
| AP2M1 | - | - | - | - | 3 | Gain | - |
| APBB1IP | - | - | - | - | 1 | Loss | - |
| APOD | - | - | - | - | 3 | Gain | - |
| ARGFX | - | - | - | - | 3 | Gain | - |
| ARHGAP12 | - | - | - | - | 1 | Loss | - |
| ARHGAP21 | - | - | - | - | 1 | Loss | - |
| ARHGAP31 | - | - | - | - | 3 | Gain | - |
| ARHGEF26 | - | - | - | - | 3 | Gain | - |
| ARHGEF7 | - | - | - | - | 3 | Gain | - |
| ARL14 | - | - | - | - | 3 | Gain | - |
| ARL5B | - | - | - | - | 1 | Loss | - |
| ARMC3 | - | - | - | - | 1 | Loss | - |
| ARMC4 | - | - | - | - | 1 | Loss | - |
| ARMC8 | - | - | - | - | 3 | Gain | - |
| ASB13 | - | - | - | - | 1 | Loss | - |
| ASTE1 | - | - | - | - | 3 | Gain | - |
| ATP11A | - | - | - | - | 3 | Gain | - |
| ATP11B | - | - | - | - | 3 | Gain | - |
| ATP13A3 | - | - | - | - | 3 | Gain | - |
| ATP13A4 | - | - | - | - | 3 | Gain | - |
| ATP13A5 | - | - | - | - | 3 | Gain | - |
| ATP1B3 | - | - | - | - | 3 | Gain | - |
| ATP2C1 | - | - | - | - | 3 | Gain | - |
| ATP4B | - | - | - | - | 3 | Gain | - |
| ATP5F1C | - | - | - | - | 1 | Loss | - |
| ATR | - | - | - | - | 3 | Gain | - |
| AZI2 | p.E15K | Missense | SNP | 0.550 | 2 | - | - |
| B3GALNT1 | - | - | - | - | 3 | Gain | - |
| B3GNT5 | - | - | - | - | 3 | Gain | - |
| B4GALT4 | - | - | - | - | 3 | Gain | - |
| BAMBI | - | - | - | - | 1 | Loss | - |
| BAZ1A | p.Q968E | Missense | SNP | 0.481 | 2 | - | - |
| BCHE | - | - | - | - | 3 | Gain | - |
| BCL6 | - | - | - | - | 3 | Gain | - |
| BDH1 | - | - | - | - | 3 | Gain | - |
| BEND7 | - | - | - | - | 1 | Loss | - |
| BFSP2 | - | - | - | - | 3 | Gain | - |
| BMI1 | - | - | - | - | 1 | Loss | - |
| BOP1 | - | - | - | - | 1 | Loss | - |
| BRD9 | - | - | - | - | 3 | Gain | - |
| BSX | p.R140Q | Missense | SNP | 0.481 | 2 | - | - |
| BTAF1 | p.S955* | Nonsense | SNP | 0.367 | 2 | - | - |
| C10orf113 | - | - | - | - | 1 | Loss | - |
| C10orf67 | - | - | - | - | 1 | Loss | - |
| C1orf35 | p.E76Q | Missense | SNP | 0.398 | 2 | - | - |
| C1QL3 | - | - | - | - | 1 | Loss | - |
| C3orf22 | - | - | - | - | 3 | Gain | - |
| C3orf30 | - | - | - | - | 3 | Gain | - |
| C3orf33 | - | - | - | - | 3 | Gain | - |
| C3orf56 | - | - | - | - | 3 | Gain | - |
| C3orf58 | - | - | - | - | 3 | Gain | - |
| C3orf70 | - | - | - | - | 3 | Gain | - |
| C3orf80 | - | - | - | - | 3 | Gain | - |
| CACNB2 | - | - | - | - | 1 | Loss | - |
| CALML3 | - | - | - | - | 1 | Loss | - |
| CALML5 | - | - | - | - | 1 | Loss | - |
| CAMK1D | - | - | - | - | 1 | Loss | - |
| CAMK2N2 | - | - | - | - | 3 | Gain | - |
| CARD6 | p.F724L | Missense | SNP | 0.471 | 2 | - | - |
| CARS2 | - | - | - | - | 3 | Gain | - |
| CASC10 | - | - | - | - | 1 | Loss | - |
| CASR | - | - | - | - | 3 | Gain | - |
| CCAR1 | p.H462D | Missense | SNP | 0.439 | 2 | - | - |
| CCDC14 | - | - | - | - | 3 | Gain | - |
| CCDC3 | - | - | - | - | 1 | Loss | - |
| CCDC39 | - | - | - | - | 3 | Gain | - |
| CCDC40 | p.D284H | Missense | SNP | 0.488 | 2 | - | - |
| CCDC50 | - | - | - | - | 3 | Gain | - |
| CCDC58 | - | - | - | - | 3 | Gain | - |
| CCDC7 | - | - | - | - | 1 | Loss | - |
| CCNL1 | - | - | - | - | 3 | Gain | - |
| CCNY | - | - | - | - | 1 | Loss | - |
| CD80 | p.F19L | Missense | SNP | 0.652 | 3 | Gain | - |
| CD86 | - | - | - | - | 3 | Gain | - |
| CDC123 | - | - | - | - | 1 | Loss | - |
| CDC16 | - | - | - | - | 3 | Gain | - |
| CDKN2A | - | - | - | - | 0 | Del | - |
| CDKN2B | - | - | - | - | 0 | Del | - |
| CDNF | - | - | - | - | 1 | Loss | - |
| CDV3 | - | - | - | - | 3 | Gain | - |
| CELF2 | - | - | - | - | 1 | Loss | - |
| CENPJ | p.E646K | Missense | SNP | 0.511 | 2 | - | - |
| CEP19 | - | - | - | - | 3 | Gain | - |
| CEP63 | - | - | - | - | 3 | Gain | - |
| CEP70 | - | - | - | - | 3 | Gain | - |
| CEP72 | - | - | - | - | 3 | Gain | - |
| CERS2 | p.F87L | Missense | SNP | 0.346 | 2 | - | - |
| CFAP100 | - | - | - | - | 3 | Gain | - |
| CFHR4 | p.D177N | Missense | SNP | 0.530 | 2 | - | - |
| CGA | p.H145Y | Missense | SNP | 0.450 | 2 | - | - |
| CHAMP1 | - | - | - | - | 3 | Gain | - |
| CHCHD6 | - | - | - | - | 3 | Gain | - |
| CHRD | - | - | - | - | 3 | Gain | - |
| CHST13 | - | - | - | - | 3 | Gain | - |
| CHST2 | - | - | - | - | 3 | Gain | - |
| CISH | p.K89N | Missense | SNP | 0.519 | 2 | - | - |
| CLCN2 | - | - | - | - | 3 | Gain | - |
| CLDN1 | - | - | - | - | 3 | Gain | - |
| CLDN11 | - | - | - | - | 3 | Gain | - |
| CLDN16 | - | - | - | - | 3 | Gain | - |
| CLDN18 | - | - | - | - | 3 | Gain | - |
| CLPTM1L | - | - | - | - | 3 | Gain | - |
| CLRN1 | - | - | - | - | 3 | Gain | - |
| CLSTN2 | - | - | - | - | 3 | Gain | - |
| CNBP | - | - | - | - | 3 | Gain | - |
| CNTLN | p.E469K | Missense | SNP | 0.447 | 2 | - | - |
| COL4A1 | - | - | - | - | 3 | Gain | - |
| COL4A2 | - | - | - | - | 3 | Gain | - |
| COL6A5 | - | - | - | - | 3 | Gain | - |
| COL6A6 | - | - | - | - | 3 | Gain | - |
| COMMD2 | - | - | - | - | 3 | Gain | - |
| COMMD3 | - | - | - | - | 1 | Loss | - |
| COMMD3-BMI1 | - | - | - | - | 1 | Loss | - |
| COPB2 | - | - | - | - | 3 | Gain | - |
| COPG1 | - | - | - | - | 3 | Gain | - |
| COX17 | - | - | - | - | 3 | Gain | - |
| CP | - | - | - | - | 3 | Gain | - |
| CPA3 | - | - | - | - | 3 | Gain | - |
| CPB1 | - | - | - | - | 3 | Gain | - |
| CPN2 | - | - | - | - | 3 | Gain | - |
| CPNE4 | - | - | - | - | 3 | Gain | - |
| CREM | - | - | - | - | 1 | Loss | - |
| CRYGS | - | - | - | - | 3 | Gain | - |
| CSMD3 | p.E476K p.H418Y | Missense Missense | SNP SNP | 0.380 0.397 | 2 | - | - |
| CSTA | - | - | - | - | 3 | Gain | - |
| CUBN | - | - | - | - | 1 | Loss | - |
| CUL2 | - | - | - | - | 1 | Loss | - |
| CUL3 | p.E687Q | Missense | SNP | 0.442 | 2 | - | - |
| CUL4A | - | - | - | - | 3 | Gain | - |
| CUL9 | p.D2119H | Missense | SNP | 0.488 | 2 | - | - |
| CYP4F12 | p.E509K | Missense | SNP | 0.505 | 2 | - | - |
| DBR1 | - | - | - | - | 3 | Gain | - |
| DCLRE1C | - | - | - | - | 1 | Loss | - |
| DCSTAMP | p.E335Q | Missense | SNP | 0.449 | 2 | - | - |
| DCUN1D1 | - | - | - | - | 3 | Gain | - |
| DCUN1D2 | - | - | - | - | 3 | Gain | - |
| DGKG | - | - | - | - | 3 | Gain | - |
| DHTKD1 | - | - | - | - | 1 | Loss | - |
| DHX36 | - | - | - | - | 3 | Gain | - |
| DIP2C | - | - | - | - | 1 | Loss | - |
| DIRC2 | - | - | - | - | 3 | Gain | - |
| DLG1 | - | - | - | - | 3 | Gain | - |
| DMRTA1 | - | - | - | - | 0 | Del | - |
| DMXL1 | p.E1797K | Missense | SNP | 0.550 | 2 | - | - |
| DNAH2 | p.E1287K | Missense | SNP | 0.484 | 2 | - | - |
| DNAJB11 | - | - | - | - | 3 | Gain | - |
| DNAJB8 | - | - | - | - | 3 | Gain | - |
| DNAJC1 | - | - | - | - | 1 | Loss | - |
| DNAJC13 | - | - | - | - | 3 | Gain | - |
| DNAJC19 | - | - | - | - | 3 | Gain | - |
| DOK2 | p.Q323* | Nonsense | SNP | 0.512 | 2 | - | - |
| DOPEY2 | p.K618N | Missense | SNP | 0.491 | ND | ND | - |
| DPP10 | p.E795* | Nonsense | SNP | 0.380 | 2 | - | - |
| DTX3L | - | - | - | - | 3 | Gain | - |
| DUSP1 | p.E239K | Missense | SNP | 0.342 | 2 | - | - |
| DVL3 | - | - | - | - | 3 | Gain | - |
| DZIP1L | - | - | - | - | 3 | Gain | - |
| EAF2 | - | - | - | - | 3 | Gain | - |
| EBLN1 | - | - | - | - | 1 | Loss | - |
| ECE2 | - | - | - | - | 3 | Gain | - |
| ECHDC3 | - | - | - | - | 1 | Loss | - |
| ECM2 | p.G54A | Missense | SNP | 0.411 | 2 | - | - |
| ECT2 | - | - | - | - | 3 | Gain | - |
| EEF1AKMT4 | - | - | - | - | 3 | Gain | - |
| EEF1AKMT4-ECE2 | - | - | - | - | 3 | Gain | - |
| EEFSEC | - | - | - | - | 3 | Gain | - |
| EEPD1 | p.R172C | Missense | SNP | 0.473 | 2 | - | - |
| EFCAB12 | - | - | - | - | 3 | Gain | - |
| EFCC1 | - | - | - | - | 3 | Gain | - |
| EGF | p.W26* | Nonsense | SNP | 0.485 | 2 | - | - |
| EHHADH | - | - | - | - | 3 | Gain | - |
| EIF2A | - | - | - | - | 3 | Gain | - |
| EIF2B5 | - | - | - | - | 3 | Gain | - |
| EIF4A2 | - | - | - | - | 3 | Gain | - |
| EIF4G1 | - | - | - | - | 3 | Gain | - |
| EIF5A2 | - | - | - | - | 3 | Gain | - |
| ELAVL2 | - | - | - | - | 0 | Del | - |
| ENKUR | - | - | - | - | 1 | Loss | - |
| EOMES | p.R597Q | Missense | SNP | 0.438 | 2 | - | - |
| EPC1 | - | - | - | - | 1 | Loss | - |
| EPHB1 | - | - | - | - | 3 | Gain | - |
| EPHB3 | - | - | - | - | 3 | Gain | - |
| EPN3 | p.E253K | Missense | SNP | 0.380 | 2 | - | - |
| ERICH6 | - | - | - | - | 3 | Gain | - |
| ESPNL | p.D268H | Missense | SNP | 0.530 | 2 | - | - |
| ESYT3 | - | - | - | - | 3 | Gain | - |
| ETV5 | - | - | - | - | 3 | Gain | - |
| F10 | - | - | - | - | 3 | Gain | - |
| F7 | - | - | - | - | 3 | Gain | - |
| FAIM | - | - | - | - | 3 | Gain | - |
| FAM107B | - | - | - | - | 1 | Loss | - |
| FAM131A | - | - | - | - | 3 | Gain | - |
| FAM162A | - | - | - | - | 3 | Gain | - |
| FAM171A1 | - | - | - | - | 1 | Loss | - |
| FAM208B | - | - | - | - | 1 | Loss | - |
| FAM43A | - | - | - | - | 3 | Gain | - |
| FAM83B | p.H126N | Missense | SNP | 0.430 | 2 | - | - |
| FBH1 | - | - | - | - | 1 | Loss | - |
| FBN2 | p.S143* | Nonsense | SNP | 0.443 | 2 | - | - |
| FBXO40 | - | - | - | - | 3 | Gain | - |
| FBXO45 | - | - | - | - | 3 | Gain | - |
| FETUB | - | - | - | - | 3 | Gain | - |
| FGF12 | - | - | - | - | 3 | Gain | - |
| FGFR3 | p.S249C | Missense | SNP | 0.459 | 2 | - | - |
| FNDC1 | p.S492F | Missense | SNP | 0.432 | 2 | - | - |
| FNDC3B | - | - | - | - | 3 | Gain | - |
| FOXL2 | - | - | - | - | 3 | Gain | - |
| FOXL2NB | - | - | - | - | 3 | Gain | - |
| FRMD4A | - | - | - | - | 1 | Loss | - |
| FSTL1 | - | - | - | - | 3 | Gain | - |
| FXR1 | - | - | - | - | 3 | Gain | - |
| FYTTD1 | - | - | - | - | 3 | Gain | - |
| FZD8 | - | - | - | - | 1 | Loss | - |
| GAD2 | - | - | - | - | 1 | Loss | - |
| GALNT11 | - | - | - | - | 1 | Loss | - |
| GAP43 | - | - | - | - | 3 | Gain | - |
| GAS6 | - | - | - | - | 3 | Gain | - |
| GATA2 | - | - | - | - | 3 | Gain | - |
| GATA3 | - | - | - | - | 1 | Loss | - |
| GDI2 | - | - | - | - | 1 | Loss | - |
| GFM1 | - | - | - | - | 3 | Gain | - |
| GHSR | - | - | - | - | 3 | Gain | - |
| GJD4 | - | - | - | - | 1 | Loss | - |
| GK5 | - | - | - | - | 3 | Gain | - |
| GMNC | - | - | - | - | 3 | Gain | - |
| GMPS | - | - | - | - | 3 | Gain | - |
| GNAS | p.F134L | Missense | SNP | 0.549 | 2 | - | - |
| GNB4 | - | - | - | - | 3 | Gain | - |
| GOLGB1 | p.Q3004* | Nonsense | SNP | 0.325 | 3 | Gain | - |
| GOLIM4 | - | - | - | - | 3 | Gain | - |
| GP5 | - | - | - | - | 3 | Gain | - |
| GP9 | - | - | - | - | 3 | Gain | - |
| GPR149 | - | - | - | - | 3 | Gain | - |
| GPR156 | - | - | - | - | 3 | Gain | - |
| GPR158 | - | - | - | - | 1 | Loss | - |
| GPR160 | - | - | - | - | 3 | Gain | - |
| GPR171 | - | - | - | - | 3 | Gain | - |
| GPR87 | - | - | - | - | 3 | Gain | - |
| GRIK1 | p.D153H | Missense | SNP | 0.430 | 2 | - | - |
| GRK1 | - | - | - | - | 3 | Gain | - |
| GRK7 | - | - | - | - | 3 | Gain | - |
| GRM5 | p.D545H | Missense | SNP | 0.378 | 2 | - | - |
| GRTP1 | - | - | - | - | 3 | Gain | - |
| GSK3B | - | - | - | - | 3 | Gain | - |
| GTF2E1 | - | - | - | - | 3 | Gain | - |
| GTPBP4 | - | - | - | - | 1 | Loss | - |
| GYG1 | - | - | - | - | 3 | Gain | - |
| H1FOO | - | - | - | - | 3 | Gain | - |
| H1FX | - | - | - | - | 3 | Gain | - |
| HACD1 | - | - | - | - | 1 | Loss | - |
| HACD2 | - | - | - | - | 3 | Gain | - |
| HCLS1 | - | - | - | - | 3 | Gain | - |
| HEATR5A | p.R1651T | Missense | SNP | 0.438 | 2 | - | - |
| HEG1 | - | - | - | - | 3 | Gain | - |
| HES1 | - | - | - | - | 3 | Gain | - |
| HGD | - | - | - | - | 3 | Gain | - |
| HIC1 | p.S252F | Missense | SNP | 0.481 | 2 | - | - |
| HIST1H3B | p.R135T p.E74K | Missense Missense | SNP SNP | 0.472 0.413 | 2 | - | - |
| HLTF | - | - | - | - | 3 | Gain | - |
| HMCES | - | - | - | - | 3 | Gain | - |
| HPS3 | - | - | - | - | 3 | Gain | - |
| HRASLS | - | - | - | - | 3 | Gain | - |
| HRG | - | - | - | - | 3 | Gain | - |
| HSDL2 | p.M371I | Missense | SNP | 0.560 | 2 | - | - |
| HSPA14 | - | - | - | - | 1 | Loss | - |
| HSPBAP1 | - | - | - | - | 3 | Gain | - |
| HTR3C | p.R24T | Missense | SNP | 0.324 | 3 | Gain | - |
| HTR3D | - | - | - | - | 3 | Gain | - |
| HTR3E | - | - | - | - | 3 | Gain | - |
| HUNK | p.S468* | Nonsense | SNP | 0.504 | 2 | - | - |
| IDH3B | p.S36* | Nonsense | SNP | 0.542 | 2 | - | - |
| IDI1 | - | - | - | - | 1 | Loss | - |
| IDI2 | - | - | - | - | 1 | Loss | - |
| IFT122 | - | - | - | - | 3 | Gain | - |
| IFT80 | - | - | - | - | 3 | Gain | - |
| IGDCC4 | p.S804C | Missense | SNP | 0.450 | 2 | - | - |
| IGF2BP2 | - | - | - | - | 3 | Gain | - |
| IGFBP2 | p.L22P | Missense | SNP | 0.283 | 2 | - | - |
| IGLV2-33 | p.H53Y | Missense | SNP | 0.521 | ND | ND | - |
| IGSF10 | - | - | - | - | 3 | Gain | - |
| IGSF11 | - | - | - | - | 3 | Gain | - |
| IL12A | - | - | - | - | 3 | Gain | - |
| IL15RA | - | - | - | - | 1 | Loss | - |
| IL1RAP | - | - | - | - | 3 | Gain | - |
| IL1RL1 | p.E146Q | Missense | SNP | 0.366 | 2 | - | - |
| IL20RB | - | - | - | - | 3 | Gain | - |
| IL2RA | - | - | - | - | 1 | Loss | - |
| ILDR1 | - | - | - | - | 3 | Gain | - |
| IMPG1 | p.R599P | Missense | SNP | 0.474 | 2 | - | - |
| ING1 | - | - | - | - | 3 | Gain | - |
| INPP5A | p.L110V | Missense | SNP | 0.451 | 2 | - | - |
| IQCB1 | - | - | - | - | 3 | Gain | - |
| IQCG | - | - | - | - | 3 | Gain | - |
| IQCJ | - | - | - | - | 3 | Gain | - |
| IQCJ-SCHIP1 | - | - | - | - | 3 | Gain | - |
| IRS2 | - | - | - | - | 3 | Gain | - |
| ISY1 | - | - | - | - | 3 | Gain | - |
| ISY1-RAB43 | - | - | - | - | 3 | Gain | - |
| ITGA8 | - | - | - | - | 1 | Loss | - |
| ITGB1 | - | - | - | - | 1 | Loss | - |
| ITGB5 | - | - | - | - | 3 | Gain | - |
| ITIH2 | - | - | - | - | 1 | Loss | - |
| ITIH5 | - | - | - | - | 1 | Loss | - |
| ITM2B | p.R51K | Missense | SNP | 0.451 | 2 | - | - |
| JCAD | - | - | - | - | 1 | Loss | - |
| KALRN | - | - | - | - | 3 | Gain | - |
| KBTBD12 | - | - | - | - | 3 | Gain | - |
| KBTBD6 | p.Q400E | Missense | SNP | 0.510 | 2 | - | - |
| KBTBD8 | - | - | - | - | 1 | Loss | - |
| KCNAB1 | - | - | - | - | 3 | Gain | - |
| KCNMB2 | - | - | - | - | 3 | Gain | - |
| KCNMB3 | - | - | - | - | 3 | Gain | - |
| KDM6A | p.Q753* | Nonsense | SNP | 0.872 | ND | ND | - |
| KIAA1217 | - | - | - | - | 1 | Loss | - |
| KIAA1257 | - | - | - | - | 3 | Gain | - |
| KIF11 | p.S3W | Missense | SNP | 0.446 | 2 | - | - |
| KIF17 | p.E321Q | Missense | SNP | 0.502 | 2 | - | - |
| KIF5B | - | - | - | - | 1 | Loss | - |
| KIN | - | - | - | - | 1 | Loss | - |
| KLF15 | - | - | - | - | 3 | Gain | - |
| KLF6 | - | - | - | - | 1 | Loss | - |
| KLHL24 | - | - | - | - | 3 | Gain | - |
| KLHL36 | p.E233Q | Missense | SNP | 0.474 | 2 | - | - |
| KLHL6 | - | - | - | - | 3 | Gain | - |
| KMT2A | p.R2641K | Missense | SNP | 0.504 | 2 | - | - |
| KMT2C | - | - | - | - | 1 | Loss | - |
| KNG1 | - | - | - | - | 3 | Gain | - |
| KPNA1 | - | - | - | - | 3 | Gain | - |
| KPNA4 | - | - | - | - | 3 | Gain | - |
| KRT6A | - | - | - | - | 2 | - | RNA5-8SN2--KRT6A |
| KY | - | - | - | - | 3 | Gain | - |
| L2HGDH | p.E142Q | Missense | SNP | 0.349 | 2 | - | - |
| LAMB4 | p.E570K | Missense | SNP | 0.429 | 2 | - | - |
| LAMP1 | - | - | - | - | 3 | Gain | - |
| LAMP3 | - | - | - | - | 3 | Gain | - |
| LAMTOR4 | p.E121Q | Missense | SNP | 0.398 | 2 | - | - |
| LARP4B | - | - | - | - | 1 | Loss | - |
| LARP6 | p.E485Q | Missense | SNP | 0.574 | 2 | - | - |
| LEKR1 | - | - | - | - | 3 | Gain | - |
| LIPH | - | - | - | - | 3 | Gain | - |
| LMBR1 | p.L358V | Missense | SNP | 0.494 | 2 | - | - |
| LMLN | - | - | - | - | 3 | Gain | - |
| LPP | - | - | - | - | 3 | Gain | - |
| LRCH3 | - | - | - | - | 3 | Gain | - |
| LRRC15 | - | - | - | - | 3 | Gain | - |
| LRRC31 | - | - | - | - | 3 | Gain | - |
| LRRC34 | - | - | - | - | 3 | Gain | - |
| LRRC58 | - | - | - | - | 3 | Gain | - |
| LRRIQ4 | - | - | - | - | 3 | Gain | - |
| LSAMP | - | - | - | - | 3 | Gain | - |
| LSG1 | - | - | - | - | 3 | Gain | - |
| LSR | p.S444F p.R445W | Missense Missense | SNP SNP | 0.507 0.518 | 2 | - | - |
| LXN | - | - | - | - | 3 | Gain | - |
| LYZL1 | - | - | - | - | 1 | Loss | - |
| LYZL2 | - | - | - | - | 1 | Loss | - |
| MAATS1 | - | - | - | - | 3 | Gain | - |
| MAGEF1 | - | - | - | - | 3 | Gain | - |
| MALRD1 | - | - | - | - | 1 | Loss | - |
| MAP3K13 | - | - | - | - | 3 | Gain | - |
| MAP3K8 | - | - | - | - | 1 | Loss | - |
| MAP6D1 | - | - | - | - | 3 | Gain | - |
| MASP1 | - | - | - | - | 3 | Gain | - |
| MASTL | - | - | - | - | 1 | Loss | - |
| MB21D2 | - | - | - | - | 3 | Gain | - |
| MBD4 | - | - | - | - | 3 | Gain | - |
| MBNL1 | - | - | - | - | 3 | Gain | - |
| MCCC1 | - | - | - | - | 3 | Gain | - |
| MCF2L | - | - | - | - | 3 | Gain | - |
| MCF2L2 | - | - | - | - | 3 | Gain | - |
| MCM10 | - | - | - | - | 1 | Loss | - |
| MCM2 | - | - | - | - | 3 | Gain | - |
| MECOM | - | - | - | - | 3 | Gain | - |
| MED12L | - | - | - | - | 3 | Gain | - |
| MED13 | p.D2008H | Missense | SNP | 0.431 | 2 | - | - |
| MEIG1 | - | - | - | - | 1 | Loss | - |
| MELTF | - | - | - | - | 3 | Gain | - |
| MFN1 | - | - | - | - | 3 | Gain | - |
| MFSD1 | - | - | - | - | 3 | Gain | - |
| MGA | p.V2045I p.R2173T | Missense Missense | SNP SNP | 0.492 0.504 | 2 | - | - |
| MGAT3 | p.S78L | Missense | SNP | 0.515 | 2 | - | - |
| MGLL | - | - | - | - | 3 | Gain | - |
| MINDY3 | - | - | - | - | 1 | Loss | - |
| MINDY4B | - | - | - | - | 3 | Gain | - |
| MKX | - | - | - | - | 1 | Loss | - |
| MLF1 | - | - | - | - | 3 | Gain | - |
| MLLT10 | - | - | - | - | 1 | Loss | - |
| MME | - | - | - | - | 3 | Gain | - |
| MMRN1 | p.Q143E | Missense | SNP | 0.462 | 2 | - | - |
| MPP7 | - | - | - | - | 1 | Loss | - |
| MRAS | - | - | - | - | 3 | Gain | - |
| MRC1 | - | - | - | - | 1 | Loss | - |
| MROH2B | p.S82C | Missense | SNP | 0.507 | 2 | - | - |
| MRPL3 | - | - | - | - | 3 | Gain | - |
| MRPL47 | - | - | - | - | 3 | Gain | - |
| MRPS22 | - | - | - | - | 3 | Gain | - |
| MSL2 | - | - | - | - | 3 | Gain | - |
| MSRB2 | - | - | - | - | 1 | Loss | - |
| MTPAP | - | - | - | - | 1 | Loss | - |
| MTX3 | p.R110K | Missense | SNP | 0.395 | 2 | - | - |
| MUC1 | p.R360G | Missense | SNP | 0.481 | 2 | - | - |
| MUC13 | - | - | - | - | 3 | Gain | - |
| MUC20 | p.S577Wfs*49 | Frame_Shift_Del | DEL | 0.542 | 3 | Gain | - |
| MUC4 | p.A3785V | Missense | SNP | 0.441 | 3 | Gain | - |
| MYBPC1 | p.K376N | Missense | SNP | 0.509 | 2 | - | - |
| MYCBP2 | p.G4092A | Missense | SNP | 0.531 | 2 | - | - |
| MYH9 | p.E495K | Missense | SNP | 0.457 | 2 | - | - |
| MYLK | - | - | - | - | 3 | Gain | - |
| MYNN | - | - | - | - | 3 | Gain | - |
| MYO3A | - | - | - | - | 1 | Loss | - |
| N4BP2L2 | p.S698L | Missense | SNP | 0.436 | 2 | - | - |
| NAALADL2 | - | - | - | - | 3 | Gain | - |
| NANOS1 | p.E178K | Missense | SNP | 0.512 | 2 | - | - |
| NAP1L3 | p.E159K | Missense | SNP | 0.407 | ND | ND | - |
| NAXD | - | - | - | - | 3 | Gain | - |
| NCBP2 | - | - | - | - | 3 | Gain | - |
| NCBP2-AS2 | - | - | - | - | 3 | Gain | - |
| NCEH1 | - | - | - | - | 3 | Gain | - |
| NCK1 | - | - | - | - | 3 | Gain | - |
| NCOA6 | p.S520L | Missense | SNP | 0.356 | 2 | - | - |
| NDUFB4 | p.R57Q | Missense | SNP | 0.343 | 3 | Gain | - |
| NDUFB5 | - | - | - | - | 3 | Gain | - |
| NEBL | - | - | - | - | 1 | Loss | - |
| NEFH | p.K947N | Missense | SNP | 0.404 | 2 | - | - |
| NEK11 | - | - | - | - | 3 | Gain | - |
| NET1 | - | - | - | - | 1 | Loss | - |
| NFASC | p.D1217H | Missense | SNP | 0.524 | 2 | - | - |
| NFATC3 | p.H70Y | Missense | SNP | 0.482 | 2 | - | - |
| NIN | p.L1906F | Missense | SNP | 0.455 | 2 | - | - |
| NKD2 | - | - | - | - | 3 | Gain | - |
| NLGN1 | - | - | - | - | 3 | Gain | - |
| NLRC4 | p.R918K | Missense | SNP | 0.376 | 2 | - | - |
| NLRP4 | p.S7C | Missense | SNP | 0.413 | 2 | - | - |
| NMD3 | - | - | - | - | 3 | Gain | - |
| NME9 | - | - | - | - | 3 | Gain | - |
| NMNAT3 | - | - | - | - | 3 | Gain | - |
| NMT2 | - | - | - | - | 1 | Loss | - |
| NOL4L | p.S310F | Missense | SNP | 0.585 | 2 | - | - |
| NPHP3 | - | - | - | - | 3 | Gain | - |
| NPHP3-ACAD11 | - | - | - | - | 3 | Gain | - |
| NR1I2 | - | - | - | - | 3 | Gain | - |
| NRP1 | p.Q382* | Nonsense | SNP | 0.929 | 1 | Loss | - |
| NRROS | - | - | - | - | 3 | Gain | - |
| NSUN6 | - | - | - | - | 1 | Loss | - |
| NUDT16 | - | - | - | - | 3 | Gain | - |
| NUDT5 | - | - | - | - | 1 | Loss | - |
| OLAH | - | - | - | - | 1 | Loss | - |
| OLFM4 | p.L109V | Missense | SNP | 0.500 | 2 | - | - |
| OPA1 | - | - | - | - | 3 | Gain | - |
| OPTN | - | - | - | - | 1 | Loss | - |
| OR2L2 | p.S229C | Missense | SNP | 0.551 | 2 | - | - |
| OR6M1 | p.E20D | Missense | SNP | 0.534 | 2 | - | - |
| OSBPL11 | - | - | - | - | 3 | Gain | - |
| OSTN | - | - | - | - | 3 | Gain | - |
| OTOL1 | - | - | - | - | 3 | Gain | - |
| OTUD1 | - | - | - | - | 1 | Loss | - |
| P2RY1 | - | - | - | - | 3 | Gain | - |
| P2RY12 | - | - | - | - | 3 | Gain | - |
| P2RY13 | - | - | - | - | 3 | Gain | - |
| P2RY14 | - | - | - | - | 3 | Gain | - |
| P3H2 | - | - | - | - | 3 | Gain | - |
| PAK2 | - | - | - | - | 3 | Gain | - |
| PAQR9 | - | - | - | - | 3 | Gain | - |
| PARD3 | - | - | - | - | 1 | Loss | - |
| PARL | - | - | - | - | 3 | Gain | - |
| PARP14 | - | - | - | - | 3 | Gain | - |
| PARP15 | - | - | - | - | 3 | Gain | - |
| PARP9 | - | - | - | - | 3 | Gain | - |
| PCCB | - | - | - | - | 3 | Gain | - |
| PCDHGA2 | p.R80L | Missense | SNP | 0.411 | 2 | - | - |
| PCID2 | - | - | - | - | 3 | Gain | - |
| PCOLCE2 | - | - | - | - | 3 | Gain | - |
| PCYT1A | - | - | - | - | 3 | Gain | - |
| PDCD10 | - | - | - | - | 3 | Gain | - |
| PDE4C | p.Q98* | Nonsense | SNP | 0.625 | 2 | - | - |
| PDIA5 | - | - | - | - | 3 | Gain | - |
| PDSS1 | - | - | - | - | 1 | Loss | - |
| PEAK1 | p.E34K | Missense | SNP | 0.371 | 2 | - | - |
| PEX5L | - | - | - | - | 3 | Gain | - |
| PFKFB3 | - | - | - | - | 1 | Loss | - |
| PFKP | - | - | - | - | 1 | Loss | - |
| PFN2 | - | - | - | - | 3 | Gain | - |
| PHC3 | - | - | - | - | 3 | Gain | - |
| PHYH | - | - | - | - | 1 | Loss | - |
| PIGX | - | - | - | - | 3 | Gain | - |
| PIGZ | - | - | - | - | 3 | Gain | - |
| PIK3CA | p.E545K | Missense | SNP | 0.589 | 3 | Gain | - |
| PIK3CB | - | - | - | - | 3 | Gain | - |
| PIK3R4 | - | - | - | - | 3 | Gain | - |
| PIP4K2A | - | - | - | - | 1 | Loss | - |
| PITRM1 | - | - | - | - | 1 | Loss | - |
| PLA1A | - | - | - | - | 3 | Gain | - |
| PLCH1 | - | - | - | - | 3 | Gain | - |
| PLD1 | - | - | - | - | 3 | Gain | - |
| PLIN1 | p.E242K | Missense | SNP | 0.489 | 2 | - | - |
| PLOD2 | - | - | - | - | 3 | Gain | - |
| PLS1 | - | - | - | - | 3 | Gain | - |
| PLSCR1 | - | - | - | - | 3 | Gain | - |
| PLSCR2 | - | - | - | - | 3 | Gain | - |
| PLSCR4 | - | - | - | - | 3 | Gain | - |
| PLSCR5 | - | - | - | - | 3 | Gain | - |
| PLXDC2 | - | - | - | - | 1 | Loss | - |
| PLXNA1 | - | - | - | - | 3 | Gain | - |
| PLXND1 | - | - | - | - | 3 | Gain | - |
| PODXL2 | - | - | - | - | 3 | Gain | - |
| POGLUT1 | - | - | - | - | 3 | Gain | - |
| POLQ | - | - | - | - | 3 | Gain | - |
| POLR2H | - | - | - | - | 3 | Gain | - |
| POPDC2 | - | - | - | - | 3 | Gain | - |
| PPM1L | - | - | - | - | 3 | Gain | - |
| PPP1R2 | - | - | - | - | 3 | Gain | - |
| PPP2R3A | - | - | - | - | 3 | Gain | - |
| PPP4R2 | p.E379K | Missense | SNP | 0.370 | 2 | - | - |
| PQLC2L | - | - | - | - | 3 | Gain | - |
| PRKCI | - | - | - | - | 3 | Gain | - |
| PRKCQ | - | - | - | - | 1 | Loss | - |
| PROSER2 | - | - | - | - | 1 | Loss | - |
| PROZ | - | - | - | - | 3 | Gain | - |
| PRPF18 | - | - | - | - | 1 | Loss | - |
| PRR23A | - | - | - | - | 3 | Gain | - |
| PRR23B | - | - | - | - | 3 | Gain | - |
| PRR23C | - | - | - | - | 3 | Gain | - |
| PRR26 | - | - | - | - | 1 | Loss | - |
| PRTFDC1 | - | - | - | - | 1 | Loss | - |
| PSMD2 | - | - | - | - | 3 | Gain | - |
| PTCHD3 | - | - | - | - | 1 | Loss | - |
| PTEN | p.M134I p.S227F | Missense Missense | SNP SNP | 0.456 0.408 | 2 | - | - |
| PTER | - | - | - | - | 1 | Loss | - |
| PTF1A | - | - | - | - | 1 | Loss | - |
| PTX3 | - | - | - | - | 3 | Gain | - |
| PXYLP1 | - | - | - | - | 3 | Gain | - |
| PYDC2 | - | - | - | - | 3 | Gain | - |
| RAB12 | p.R214S | Missense | SNP | 0.478 | 2 | - | - |
| RAB18 | - | - | - | - | 1 | Loss | - |
| RAB20 | - | - | - | - | 3 | Gain | - |
| RAB43 | - | - | - | - | 3 | Gain | - |
| RAB6B | - | - | - | - | 3 | Gain | - |
| RAB7A | - | - | - | - | 3 | Gain | - |
| RABL3 | - | - | - | - | 3 | Gain | - |
| RAP2B | - | - | - | - | 3 | Gain | - |
| RARRES1 | - | - | - | - | 3 | Gain | - |
| RASA2 | - | - | - | - | 3 | Gain | - |
| RASA3 | - | - | - | - | 3 | Gain | - |
| RASL12 | p.E148K | Missense | SNP | 0.544 | 2 | - | - |
| RBM17 | - | - | - | - | 1 | Loss | - |
| RBP1 | - | - | - | - | 3 | Gain | - |
| RBP2 | - | - | - | - | 3 | Gain | - |
| RFC4 | - | - | - | - | 3 | Gain | - |
| RHO | - | - | - | - | 3 | Gain | - |
| RHOBTB1 | p.R205* | Nonsense | SNP | 0.392 | 2 | - | - |
| RNA5-8SN2 | - | - | - | - | ND | ND | RNA5-8SN2--KRT6A |
| RNF13 | - | - | - | - | 3 | Gain | - |
| RNF168 | - | - | - | - | 3 | Gain | - |
| RNF7 | - | - | - | - | 3 | Gain | - |
| ROPN1 | - | - | - | - | 3 | Gain | - |
| ROPN1B | - | - | - | - | 3 | Gain | - |
| RP11-310K10.1 | p.E565K | Missense | SNP | 0.498 | ND | ND | - |
| RPA3 | p.D3N | Missense | SNP | 0.478 | 2 | - | - |
| RPL22 | p.K16Efs*9 | Frame_Shift_Ins | INS | 0.256 | 2 | - | - |
| RPL22L1 | - | - | - | - | 3 | Gain | - |
| RPL35A | - | - | - | - | 3 | Gain | - |
| RPL39L | - | - | - | - | 3 | Gain | - |
| RPN1 | - | - | - | - | 3 | Gain | - |
| RPP38 | - | - | - | - | 1 | Loss | - |
| RPS6KC1 | p.S188F | Missense | SNP | 0.441 | 2 | - | - |
| RSRC1 | - | - | - | - | 3 | Gain | - |
| RSU1 | - | - | - | - | 1 | Loss | - |
| RTP1 | - | - | - | - | 3 | Gain | - |
| RTP2 | - | - | - | - | 3 | Gain | - |
| RTP4 | - | - | - | - | 3 | Gain | - |
| RUBCN | - | - | - | - | 3 | Gain | - |
| RUNX1 | p.E456K | Missense | SNP | 0.431 | 2 | - | - |
| RUVBL1 | - | - | - | - | 3 | Gain | - |
| RYK | - | - | - | - | 3 | Gain | - |
| RYR2 | p.R1598K p.E1815K | Missense Missense | SNP SNP | 0.390 0.450 | 2 | - | - |
| SAMD7 | - | - | - | - | 3 | Gain | - |
| SCHIP1 | - | - | - | - | 3 | Gain | - |
| SCNN1B | p.E539Q | Missense | SNP | 0.363 | 2 | - | - |
| SCX | - | - | - | - | 1 | Loss | - |
| SEC22A | - | - | - | - | 3 | Gain | - |
| SEC61A1 | - | - | - | - | 3 | Gain | - |
| SEC61A2 | - | - | - | - | 1 | Loss | - |
| SEC62 | - | - | - | - | 3 | Gain | - |
| SELENOT | - | - | - | - | 3 | Gain | - |
| SEMA5B | - | - | - | - | 3 | Gain | - |
| SENP2 | - | - | - | - | 3 | Gain | - |
| SENP5 | - | - | - | - | 3 | Gain | - |
| SEPHS1 | - | - | - | - | 1 | Loss | - |
| SERP1 | - | - | - | - | 3 | Gain | - |
| SERPINI1 | - | - | - | - | 3 | Gain | - |
| SERPINI2 | - | - | - | - | 3 | Gain | - |
| SFMBT2 | - | - | - | - | 1 | Loss | - |
| SHOX2 | - | - | - | - | 3 | Gain | - |
| SI | - | - | - | - | 3 | Gain | - |
| SIAH2 | - | - | - | - | 3 | Gain | - |
| SKIDA1 | - | - | - | - | 1 | Loss | - |
| SKIL | - | - | - | - | 3 | Gain | - |
| SLC12A7 | - | - | - | - | 3 | Gain | - |
| SLC12A8 | - | - | - | - | 3 | Gain | - |
| SLC15A2 | - | - | - | - | 3 | Gain | - |
| SLC25A36 | - | - | - | - | 3 | Gain | - |
| SLC26A11 | p.S467F | Missense | SNP | 0.369 | 2 | - | - |
| SLC2A2 | - | - | - | - | 3 | Gain | - |
| SLC33A1 | - | - | - | - | 3 | Gain | - |
| SLC35B1 | p.S216L | Missense | SNP | 0.340 | 2 | - | - |
| SLC35G2 | - | - | - | - | 3 | Gain | - |
| SLC39A12 | - | - | - | - | 1 | Loss | - |
| SLC41A3 | - | - | - | - | 3 | Gain | - |
| SLC51A | - | - | - | - | 3 | Gain | - |
| SLC6A18 | - | - | - | - | 3 | Gain | - |
| SLC6A19 | - | - | - | - | 3 | Gain | - |
| SLC6A3 | - | - | - | - | 3 | Gain | - |
| SLC7A14 | - | - | - | - | 3 | Gain | - |
| SLC9A9 | - | - | - | - | 3 | Gain | - |
| SLC9C2 | p.S307L | Missense | SNP | 0.388 | 2 | - | - |
| SLCO2A1 | - | - | - | - | 3 | Gain | - |
| SLITRK3 | - | - | - | - | 3 | Gain | - |
| SMAD3 | p.S422F | Missense | SNP | 0.557 | 2 | - | - |
| SMARCA5 | - | - | - | - | 3 | Gain | - |
| SMC4 | - | - | - | - | 3 | Gain | - |
| SMCO1 | - | - | - | - | 3 | Gain | - |
| SMYD4 | p.G86E | Missense | SNP | 0.344 | 2 | - | - |
| SNX4 | - | - | - | - | 3 | Gain | - |
| SOGA1 | p.S1322L | Missense | SNP | 0.502 | 2 | - | - |
| SOX1 | - | - | - | - | 3 | Gain | - |
| SOX14 | - | - | - | - | 3 | Gain | - |
| SOX2 | - | - | - | - | 3 | Gain | - |
| SP100 | p.R182Q | Missense | SNP | 0.482 | 2 | - | - |
| SPACA7 | - | - | - | - | 3 | Gain | - |
| SPAG6 | - | - | - | - | 1 | Loss | - |
| SPATA16 | - | - | - | - | 3 | Gain | - |
| SPSB4 | - | - | - | - | 3 | Gain | - |
| SPTBN2 | p.R2211G | Missense | SNP | 0.460 | 2 | - | - |
| SPTSSB | - | - | - | - | 3 | Gain | - |
| SRPRB | - | - | - | - | 3 | Gain | - |
| SSR3 | - | - | - | - | 3 | Gain | - |
| SST | - | - | - | - | 3 | Gain | - |
| ST6GAL1 | - | - | - | - | 3 | Gain | - |
| ST8SIA6 | - | - | - | - | 1 | Loss | - |
| STAG1 | - | - | - | - | 3 | Gain | - |
| STAG2 | p.E583* | Nonsense | SNP | 0.971 | ND | ND | - |
| STAM | - | - | - | - | 1 | Loss | - |
| STXBP5L | - | - | - | - | 3 | Gain | - |
| SUCNR1 | - | - | - | - | 3 | Gain | - |
| SUV39H2 | - | - | - | - | 1 | Loss | - |
| SVEP1 | p.E3214Q | Missense | SNP | 0.507 | 2 | - | - |
| SVIL | - | - | - | - | 1 | Loss | - |
| TAF3 | - | - | - | - | 1 | Loss | - |
| TBC1D10A | p.E511K | Missense | SNP | 0.459 | 2 | - | - |
| TBCCD1 | - | - | - | - | 3 | Gain | - |
| TBL1XR1 | - | - | - | - | 3 | Gain | - |
| TCEB3B | p.E461Q | Missense | SNP | 0.593 | ND | ND | - |
| TCTEX1D2 | - | - | - | - | 3 | Gain | - |
| TECRL | p.M329I | Missense | SNP | 0.469 | 2 | - | - |
| TERT | - | - | - | - | 3 | Gain | - |
| TEX29 | - | - | - | - | 3 | Gain | - |
| TF | - | - | - | - | 3 | Gain | - |
| TFDP1 | - | - | - | - | 3 | Gain | - |
| TFDP2 | - | - | - | - | 3 | Gain | - |
| TFRC | - | - | - | - | 3 | Gain | - |
| THNSL1 | - | - | - | - | 1 | Loss | - |
| THPO | - | - | - | - | 3 | Gain | - |
| TIMMDC1 | - | - | - | - | 3 | Gain | - |
| TIPARP | - | - | - | - | 3 | Gain | - |
| TLL1 | p.E496Q | Missense | SNP | 0.390 | 2 | - | - |
| TM4SF1 | - | - | - | - | 3 | Gain | - |
| TM4SF18 | - | - | - | - | 3 | Gain | - |
| TM4SF19 | - | - | - | - | 3 | Gain | - |
| TM4SF19-TCTEX1D2 | - | - | - | - | 3 | Gain | - |
| TM4SF4 | - | - | - | - | 3 | Gain | - |
| TMCC1 | - | - | - | - | 3 | Gain | - |
| TMCO3 | - | - | - | - | 3 | Gain | - |
| TMEM108 | - | - | - | - | 3 | Gain | - |
| TMEM132A | p.Q877E | Missense | SNP | 0.473 | 2 | - | - |
| TMEM132E | p.R548Q | Missense | SNP | 0.453 | 2 | - | - |
| TMEM207 | - | - | - | - | 3 | Gain | - |
| TMEM212 | - | - | - | - | 3 | Gain | - |
| TMEM236 | - | - | - | - | 1 | Loss | - |
| TMEM255B | - | - | - | - | 3 | Gain | - |
| TMEM39A | - | - | - | - | 3 | Gain | - |
| TMEM41A | - | - | - | - | 3 | Gain | - |
| TMEM44 | - | - | - | - | 3 | Gain | - |
| TNFSF10 | - | - | - | - | 3 | Gain | - |
| TNIK | - | - | - | - | 3 | Gain | - |
| TNK2 | - | - | - | - | 3 | Gain | - |
| TOPBP1 | - | - | - | - | 3 | Gain | - |
| TP63 | - | - | - | - | 3 | Gain | - |
| TPPP | - | - | - | - | 3 | Gain | - |
| TPRA1 | p.S293F | Missense | SNP | 0.275 | 3 | Gain | - |
| TPRG1 | - | - | - | - | 3 | Gain | - |
| TRA2B | - | - | - | - | 3 | Gain | - |
| TRAF3IP1 | p.R182Q | Missense | SNP | 0.430 | 2 | - | - |
| TRAPPC4 | p.E27K | Missense | SNP | 0.450 | 2 | - | - |
| TRDMT1 | - | - | - | - | 1 | Loss | - |
| TRH | - | - | - | - | 3 | Gain | - |
| TRIM42 | - | - | - | - | 3 | Gain | - |
| TRIM59 | - | - | - | - | 3 | Gain | - |
| TRIP13 | - | - | - | - | 3 | Gain | - |
| TRPC1 | - | - | - | - | 3 | Gain | - |
| TSC22D2 | - | - | - | - | 3 | Gain | - |
| TTC14 | - | - | - | - | 3 | Gain | - |
| TUBA1B | p.E433Q | Missense | SNP | 0.364 | 2 | - | - |
| TUBAL3 | - | - | - | - | 1 | Loss | - |
| TUBB8 | - | - | - | - | 1 | Loss | - |
| TUBGCP3 | - | - | - | - | 3 | Gain | - |
| TXNRD3 | - | - | - | - | 3 | Gain | - |
| U2SURP | - | - | - | - | 3 | Gain | - |
| UBA5 | - | - | - | - | 3 | Gain | - |
| UBXN7 | - | - | - | - | 3 | Gain | - |
| UCMA | - | - | - | - | 1 | Loss | - |
| UCN3 | - | - | - | - | 1 | Loss | - |
| UGT2A3 | p.R257Q | Missense | SNP | 0.552 | 2 | - | - |
| UGT2B10 | p.W336* | Nonsense | SNP | 0.581 | 2 | - | - |
| UMPS | - | - | - | - | 3 | Gain | - |
| UNC79 | p.E1282K | Missense | SNP | 0.497 | 2 | - | - |
| UPF2 | - | - | - | - | 1 | Loss | - |
| UPF3A | - | - | - | - | 3 | Gain | - |
| UPK1B | - | - | - | - | 3 | Gain | - |
| UROC1 | - | - | - | - | 3 | Gain | - |
| USP13 | - | - | - | - | 3 | Gain | - |
| USP15 | p.R710P | Missense | SNP | 0.470 | 2 | - | - |
| USP6NL | - | - | - | - | 1 | Loss | - |
| UTS2B | - | - | - | - | 3 | Gain | - |
| VEPH1 | - | - | - | - | 3 | Gain | - |
| VIM | - | - | - | - | 1 | Loss | - |
| VPS8 | - | - | - | - | 3 | Gain | - |
| VWA5B2 | - | - | - | - | 3 | Gain | - |
| WAC | - | - | - | - | 1 | Loss | - |
| WDR37 | - | - | - | - | 1 | Loss | - |
| WDR49 | - | - | - | - | 3 | Gain | - |
| WDR53 | - | - | - | - | 3 | Gain | - |
| WDR5B | - | - | - | - | 3 | Gain | - |
| WWTR1 | - | - | - | - | 3 | Gain | - |
| XRN1 | - | - | - | - | 3 | Gain | - |
| XXYLT1 | - | - | - | - | 3 | Gain | - |
| YEATS2 | - | - | - | - | 3 | Gain | - |
| YME1L1 | - | - | - | - | 1 | Loss | - |
| ZBBX | - | - | - | - | 3 | Gain | - |
| ZBTB25 | p.S126L | Missense | SNP | 0.519 | 2 | - | - |
| ZBTB38 | - | - | - | - | 3 | Gain | - |
| ZC3H4 | p.P1154T | Missense | SNP | 0.435 | 2 | - | - |
| ZDHHC11 | - | - | - | - | 3 | Gain | - |
| ZDHHC11B | - | - | - | - | 3 | Gain | - |
| ZDHHC19 | - | - | - | - | 3 | Gain | - |
| ZEB1 | - | - | - | - | 1 | Loss | - |
| ZFHX3 | p.S6L | Missense | SNP | 0.389 | 2 | - | - |
| ZIC1 | - | - | - | - | 3 | Gain | - |
| ZIC4 | - | - | - | - | 3 | Gain | - |
| ZMAT3 | - | - | - | - | 3 | Gain | - |
| ZMYND11 | - | - | - | - | 1 | Loss | - |
| ZNF148 | - | - | - | - | 3 | Gain | - |
| ZNF248 | - | - | - | - | 1 | Loss | - |
| ZNF25 | - | - | - | - | 1 | Loss | - |
| ZNF292 | p.H1927Y | Missense | SNP | 0.407 | 2 | - | - |
| ZNF33A | - | - | - | - | 1 | Loss | - |
| ZNF37A | - | - | - | - | 1 | Loss | - |
| ZNF438 | - | - | - | - | 1 | Loss | - |
| ZNF560 | p.R532C p.Q304* | Missense Nonsense | SNP SNP | 0.479 0.475 | 2 | - | - |
| ZNF639 | - | - | - | - | 3 | Gain | - |
| ZXDC | - | - | - | - | 3 | Gain | - |
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