PDMR-381249~077-R~GFK-P0

Variant Type	Calling Status
Mutations	Called
Copy number	Called
Fusions	No Data

Gene	Somatic Mutations	Classification	Type	VAF	Somatic Copy Number	CN status	Fusions
ABL1	p.P937L	Missense	SNP	0.486	2	-	ND
AC007326.4	-	-	-	-	1	Loss	ND
AC093668.1	-	-	-	-	0	Del	ND
AC093668.2	-	-	-	-	0	Del	ND
AC093668.3	-	-	-	-	0	Del	ND
AC105052.1	-	-	-	-	0	Del	ND
AC105052.3	-	-	-	-	0	Del	ND
ACVR1	p.R375H	Missense	SNP	0.494	2	-	ND
ADAM29	p.R723H	Missense	SNP	0.520	2	-	ND
ADD1	p.V585I	Missense	SNP	0.573	2	-	ND
AL445238.1	-	-	-	-	3	Gain	ND
AL445989.1	-	-	-	-	3	Gain	ND
ALPG	-	-	-	-	0	Del	ND
ALPP	-	-	-	-	0	Del	ND
ARGFX	-	-	-	-	3	Gain	ND
ARMC2	p.A231V	Missense	SNP	0.172	2	-	ND
ARSF	p.A112P	Missense	SNP	0.432	ND	ND	ND
ATRIP	p.C487Y	Missense	SNP	0.519	2	-	ND
AUP1	p.R227C	Missense	SNP	0.430	2	-	ND
B3GNT6	p.G221D	Missense	SNP	0.537	2	-	ND
B4GALNT4	p.V625M	Missense	SNP	0.426	2	-	ND
BCL9	p.R371C	Missense	SNP	0.520	2	-	ND
BICC1	p.K156*	Nonsense	SNP	0.467	2	-	ND
BRINP3	p.R159*	Nonsense	SNP	0.407	2	-	ND
BRPF3	p.R897C	Missense	SNP	0.522	2	-	ND
BSND	p.D3N	Missense	SNP	0.468	2	-	ND
C12orf42	p.P244L	Missense	SNP	0.580	2	-	ND
C4A	-	-	-	-	1	Loss	ND
C4B	-	-	-	-	1	Loss	ND
C6orf47	p.P214L	Missense	SNP	0.496	2	-	ND
CASS4	p.S232N	Missense	SNP	0.500	2	-	ND
CCDC115	-	-	-	-	1	Loss	ND
CCDC39	p.R214C	Missense	SNP	0.568	2	-	ND
CCDC53	p.T37I	Missense	SNP	0.474	ND	ND	ND
CCDC74B	-	-	-	-	1	Loss	ND
CCDC77	p.X348_splice	Splice_Site	SNP	0.606	2	-	ND
CD93	p.V32M	Missense	SNP	0.641	2	-	ND
CDC73	p.V445I	Missense	SNP	0.573	2	-	ND
CHADL	p.R708S	Missense	SNP	0.523	2	-	ND
CHL1	p.G874E	Missense	SNP	0.414	2	-	ND
CILP2	p.G779D	Missense	SNP	0.489	2	-	ND
CIZ1	p.R740*	Nonsense	SNP	0.516	2	-	ND
CLEC14A	p.R161*	Nonsense	SNP	0.442	2	-	ND
CSAD	p.R204C	Missense	SNP	0.514	2	-	ND
CYP21A2	-	-	-	-	1	Loss	ND
CYP2A7	p.M18V	Missense	SNP	0.155	2	-	ND
DACH1	-	-	-	-	3	Gain	ND
DDX54	p.I393V	Missense	SNP	0.541	2	-	ND
DEFB103A	-	-	-	-	1	Loss	ND
DEFB103B	-	-	-	-	1	Loss	ND
DEFB104A	-	-	-	-	1	Loss	ND
DEFB104B	-	-	-	-	1	Loss	ND
DEFB105A	-	-	-	-	1	Loss	ND
DEFB105B	-	-	-	-	1	Loss	ND
DEFB106A	-	-	-	-	1	Loss	ND
DEFB106B	-	-	-	-	1	Loss	ND
DEFB107A	-	-	-	-	1	Loss	ND
DEFB107B	-	-	-	-	1	Loss	ND
DEFB4A	-	-	-	-	1	Loss	ND
DEFB4B	-	-	-	-	1	Loss	ND
DGCR6	-	-	-	-	1	Loss	ND
DNAJC18	p.A3V	Missense	SNP	0.492	2	-	ND
DSCAML1	p.T1105M p.A917T	Missense Missense	SNP SNP	0.631 0.497	2	-	ND
ELFN2	p.R739H	Missense	SNP	0.440	2	-	ND
EP300	p.T524M	Missense	SNP	0.115	2	-	ND
ERC2	p.A835T	Missense	SNP	0.439	2	-	ND
FAM110D	p.P79L	Missense	SNP	0.505	2	-	ND
FAM185A	-	-	-	-	0	Del	ND
FAT4	p.I3286M	Missense	SNP	0.472	2	-	ND
FBXL13	-	-	-	-	0	Del	ND
FBXO40	-	-	-	-	3	Gain	ND
FLG	p.G2251*	Nonsense	SNP	0.488	2	-	ND
FLRT2	-	-	-	-	3	Gain	ND
GLRA4	p.R106H	Missense	SNP	0.566	ND	ND	ND
GLT8D1	-	-	-	-	3	Gain	ND
GNL3	-	-	-	-	3	Gain	ND
GOLGB1	-	-	-	-	3	Gain	ND
GPC5	-	-	-	-	3	Gain	ND
GPC6	-	-	-	-	3	Gain	ND
GUF1	p.R631Q	Missense	SNP	0.486	2	-	ND
HCLS1	-	-	-	-	3	Gain	ND
HERC1	p.D2781N	Missense	SNP	0.228	2	-	ND
HRNR	p.H893Q	Missense	SNP	0.452	2	-	ND
HYOU1	p.R98S	Missense	SNP	0.580	2	-	ND
IFT140	p.E790K	Missense	SNP	0.436	2	-	ND
IMP4	-	-	-	-	1	Loss	ND
IQCB1	-	-	-	-	3	Gain	ND
IREB2	p.R51*	Nonsense	SNP	0.488	2	-	ND
KANK4	p.R219Q	Missense	SNP	0.473	2	-	ND
KCNA7	p.A262T	Missense	SNP	0.501	2	-	ND
KCTD18	p.P383L	Missense	SNP	0.524	2	-	ND
KIAA1024	p.P754L	Missense	SNP	0.516	2	-	ND
KIF13B	p.R306S	Missense	SNP	0.489	2	-	ND
KLHL1	-	-	-	-	3	Gain	ND
KRAS	p.G13D	Missense	SNP	0.421	2	-	ND
KRT10	p.R370H	Missense	SNP	0.459	2	-	ND
LRP12	p.R746*	Nonsense	SNP	0.490	2	-	ND
LRRTM1	p.A395V	Missense	SNP	0.475	2	-	ND
LTN1	p.A211T	Missense	SNP	0.472	2	-	ND
MAGEL2	p.R899C	Missense	SNP	0.461	2	-	ND
MARCH7	p.T36S	Missense	SNP	0.406	2	-	ND
MAX	p.H28R	Missense	SNP	0.400	2	-	ND
MED12	p.R1627C	Missense	SNP	0.486	ND	ND	ND
MIS18BP1	p.R237Q	Missense	SNP	0.514	2	-	ND
MISP	p.A196V	Missense	SNP	0.476	2	-	ND
MRPL11	p.R154C	Missense	SNP	0.518	2	-	ND
MUC17	p.R2342C	Missense	SNP	0.528	2	-	ND
MZT2B	-	-	-	-	1	Loss	ND
NEK4	-	-	-	-	3	Gain	ND
NPHP3	p.N123K	Missense	SNP	0.482	2	-	ND
NTNG1	-	-	-	-	3	Gain	ND
NUP205	p.R1990*	Nonsense	SNP	0.462	2	-	ND
OBSCN	p.A470T	Missense	SNP	0.541	2	-	ND
OR4K5	p.S6Y	Missense	SNP	0.546	2	-	ND
PABPC4L	-	-	-	-	3	Gain	ND
PAGE1	p.R11H	Missense	SNP	0.485	ND	ND	ND
PARP3	p.R415C	Missense	SNP	0.336	2	-	ND
PCDH10	-	-	-	-	3	Gain	ND
PCDH17	-	-	-	-	3	Gain	ND
PCDH18	-	-	-	-	3	Gain	ND
PCDH7	-	-	-	-	3	Gain	ND
PCDH9	-	-	-	-	3	Gain	ND
PCIF1	p.E200K	Missense	SNP	0.402	2	-	ND
PDE6B	p.A471T	Missense	SNP	0.572	2	-	ND
PEG10	p.A205V	Missense	SNP	0.187	2	-	ND
PIK3R1	p.R358* p.X582_splice	Nonsense Splice_Site	SNP SNP	0.518 0.541	2	-	ND
PLOD1	p.H225R	Missense	SNP	0.636	2	-	ND
PODXL	p.V107M	Missense	SNP	0.507	2	-	ND
POLR2J2	-	-	-	-	0	Del	ND
POLR2J3	-	-	-	-	0	Del	ND
PPFIBP2	p.R110C	Missense	SNP	0.394	2	-	ND
PPM1F	p.R167H	Missense	SNP	0.525	2	-	ND
PRAG1	-	-	-	-	1	Loss	ND
PRMT6	-	-	-	-	3	Gain	ND
PRODH	-	-	-	-	1	Loss	ND
PRR23D1	-	-	-	-	1	Loss	ND
PRR23D2	-	-	-	-	1	Loss	ND
PTPN18	-	-	-	-	1	Loss	ND
PTPRD	p.P1257L	Missense	SNP	0.525	2	-	ND
PTPRS	p.A918V	Missense	SNP	0.477	2	-	ND
PTRF	p.E188K	Missense	SNP	0.500	ND	ND	ND
RAB11FIP1	p.A413S	Missense	SNP	0.461	2	-	ND
RAB6C	-	-	-	-	1	Loss	ND
RASA4	-	-	-	-	0	Del	ND
RASA4B	-	-	-	-	0	Del	ND
REV1	p.S504L	Missense	SNP	0.180	2	-	ND
RGPD1	-	-	-	-	0	Del	ND
RGPD2	-	-	-	-	0	Del	ND
RNF214	p.R482H	Missense	SNP	0.461	2	-	ND
RP1	p.R193H	Missense	SNP	0.484	2	-	ND
RSAD1	p.R396Q	Missense	SNP	0.551	2	-	ND
SERPINF2	p.G68*	Nonsense	SNP	0.509	2	-	ND
SETD2	p.R540Q	Missense	SNP	0.487	2	-	ND
SH2D3C	p.A443S	Missense	SNP	0.447	2	-	ND
SI	-	-	-	-	3	Gain	ND
SKI	p.A540V	Missense	SNP	0.563	2	-	ND
SLC22A8	p.R50C	Missense	SNP	0.522	2	-	ND
SLC38A5	p.R339H	Missense	SNP	0.429	ND	ND	ND
SLC45A3	p.P309L	Missense	SNP	0.379	2	-	ND
SLC7A11	-	-	-	-	3	Gain	ND
SLCO1A2	p.E297K	Missense	SNP	0.529	2	-	ND
SLITRK1	-	-	-	-	3	Gain	ND
SLITRK5	-	-	-	-	3	Gain	ND
SLITRK6	-	-	-	-	3	Gain	ND
SMPD4	-	-	-	-	1	Loss	ND
SOX3	p.R22W	Missense	SNP	0.486	ND	ND	ND
SPAG11A	-	-	-	-	1	Loss	ND
SPAG11B	-	-	-	-	1	Loss	ND
SPATA31D1	-	-	-	-	1	Loss	ND
SPATA31D3	-	-	-	-	1	Loss	ND
SPATA31D4	-	-	-	-	1	Loss	ND
SPCS1	-	-	-	-	3	Gain	ND
SULT1B1	-	-	-	-	1	Loss	ND
TAF1	p.G1292E	Missense	SNP	0.497	ND	ND	ND
TCEB3B	p.R235C	Missense	SNP	0.508	ND	ND	ND
TMEM132D	p.R853W	Missense	SNP	0.507	2	-	ND
TMEM178A	p.A141T	Missense	SNP	0.453	2	-	ND
TMEM191B	-	-	-	-	1	Loss	ND
TMEM218	p.V12M	Missense	SNP	0.488	2	-	ND
TNXB	-	-	-	-	1	Loss	ND
TOR4A	p.A208V	Missense	SNP	0.448	2	-	ND
TRIM52	p.C227*	Nonsense	SNP	0.503	2	-	ND
TRIM56	p.R212Q	Missense	SNP	0.121	2	-	ND
TSHZ1	p.E80K	Missense	SNP	0.137	2	-	ND
TUBA3E	-	-	-	-	1	Loss	ND
TUBAL3	p.V216I	Missense	SNP	0.457	2	-	ND
UBASH3B	p.E436K	Missense	SNP	0.472	2	-	ND
UGT2A1	-	-	-	-	1	Loss	ND
UGT2A2	-	-	-	-	1	Loss	ND
UGT2A3	-	-	-	-	1	Loss	ND
UGT2B10	-	-	-	-	1	Loss	ND
UGT2B11	-	-	-	-	1	Loss	ND
UGT2B15	-	-	-	-	1	Loss	ND
UGT2B17	-	-	-	-	1	Loss	ND
UGT2B28	-	-	-	-	1	Loss	ND
UGT2B4	-	-	-	-	1	Loss	ND
UGT2B7	-	-	-	-	1	Loss	ND
UNC13B	p.R1085C	Missense	SNP	0.524	2	-	ND
UNC5CL	p.R244H	Missense	SNP	0.492	2	-	ND
UPK3BL1	-	-	-	-	0	Del	ND
UROC1	p.G72R	Missense	SNP	0.519	2	-	ND
USP17L1	-	-	-	-	1	Loss	ND
USP17L3	-	-	-	-	1	Loss	ND
USP17L4	-	-	-	-	1	Loss	ND
USP17L8	-	-	-	-	1	Loss	ND
VPS13C	p.N23S	Missense	SNP	0.505	2	-	ND
ZBP1	p.R109W	Missense	SNP	0.481	2	-	ND
ZC3H7A	p.L389V	Missense	SNP	0.583	2	-	ND
ZFP36L2	p.C299Y	Missense	SNP	0.487	2	-	ND
ZNF169	p.R549C	Missense	SNP	0.493	2	-	ND
ZWINT	-	-	-	-	3	Gain	ND