MDACC-TC454-PDX-P0

Gene	Somatic Mutations	Classification	Type	VAF	Somatic Copy Number	CN status	Fusions
AC004080.3	-	-	-	-	0	Del	ND
AC012531.2	-	-	-	-	0	Del	ND
AC097634.4	-	-	-	-	0	Del	ND
ANKRD52	-	-	-	-	1	Loss	ND
BRPF1	-	-	-	-	1	Loss	ND
CAMK1	-	-	-	-	1	Loss	ND
CAV3	-	-	-	-	1	Loss	ND
CNOT2	-	-	-	-	0	Del	ND
CPNE9	-	-	-	-	1	Loss	ND
FOXP1	-	-	-	-	0	Del	ND
HOXA1	-	-	-	-	0	Del	ND
HOXA10	-	-	-	-	0	Del	ND
HOXA11	-	-	-	-	0	Del	ND
HOXA13	-	-	-	-	0	Del	ND
HOXA2	-	-	-	-	0	Del	ND
HOXA3	-	-	-	-	0	Del	ND
HOXA4	-	-	-	-	0	Del	ND
HOXA5	-	-	-	-	0	Del	ND
HOXA6	-	-	-	-	0	Del	ND
HOXA7	-	-	-	-	0	Del	ND
HOXA9	-	-	-	-	0	Del	ND
HOXC10	-	-	-	-	0	Del	ND
HOXC11	-	-	-	-	0	Del	ND
HOXC12	-	-	-	-	0	Del	ND
HOXC13	-	-	-	-	0	Del	ND
HOXC4	-	-	-	-	0	Del	ND
HOXC5	-	-	-	-	0	Del	ND
HOXC6	-	-	-	-	0	Del	ND
HOXC8	-	-	-	-	0	Del	ND
HOXC9	-	-	-	-	0	Del	ND
KMT2C	p.T820I	Missense	SNP	0.235	2	-	ND
LHFPL4	-	-	-	-	1	Loss	ND
LMCD1	-	-	-	-	1	Loss	ND
MLLT10	-	-	-	-	0	Del	ND
MTMR14	-	-	-	-	1	Loss	ND
NFIB	-	-	-	-	1	Loss	ND
NIPBL	-	-	-	-	1	Loss	ND
OGG1	-	-	-	-	1	Loss	ND
OXTR	-	-	-	-	1	Loss	ND
PAK2	p.K128R	Missense	SNP	0.176	2	-	ND
RAD18	-	-	-	-	1	Loss	ND
SETD5	-	-	-	-	1	Loss	ND
SKIDA1	-	-	-	-	0	Del	ND
SLC5A11	-	-	-	-	0	Del	ND
SRGAP3	-	-	-	-	1	Loss	ND
SSUH2	-	-	-	-	1	Loss	ND
THUMPD3	-	-	-	-	1	Loss	ND
TUBA1A	-	-	-	-	0	Del	ND
TUBA1B	-	-	-	-	0	Del	ND
TUBA1C	-	-	-	-	0	Del	ND
TUSC5	p.F20S	Missense	SNP	0.111	ND	ND	ND
ZDHHC21	-	-	-	-	1	Loss	ND
ZNF117	p.S300T	Missense	SNP	0.259	2	-	ND
ZNF253	p.R201K	Missense	SNP	0.186	2	-	ND
ZNF429	p.K316E	Missense	SNP	0.250	2	-	ND
ZNF678	p.Q322K	Missense	SNP	0.122	2	-	ND
ZNF729	p.D324E	Missense	SNP	0.176	2	-	ND