MDACC-TC370-PDX-P0

Variant Type	Calling Status
Mutations	Called
Copy number	Called
Fusions	No Data

Gene	Somatic Mutations	Classification	Type	VAF	Somatic Copy Number	CN status	Fusions
AC004080.3	-	-	-	-	0	Del	ND
AC012531.2	-	-	-	-	0	Del	ND
ACVR2A	-	-	-	-	1	Loss	ND
ADGRB3	p.N916K	Missense	SNP	0.088	2	-	ND
ADGRG4	p.S345P	Missense	SNP	0.141	ND	ND	ND
AL022578.1	p.C192Y	Missense	SNP	0.060	ND	ND	ND
ASPHD2	p.K164N	Missense	SNP	0.159	2	-	ND
CAMK2G	p.L67V	Missense	SNP	0.094	2	-	ND
CCDC82	p.K399T	Missense	SNP	0.110	2	-	ND
CD300LF	p.H165Q	Missense	SNP	0.122	2	-	ND
CNST	p.S550R	Missense	SNP	0.107	2	-	ND
DAW1	p.F82L	Missense	SNP	0.068	2	-	ND
DNAAF1	p.L220F	Missense	SNP	0.120	2	-	ND
DNAH7	p.K2577R	Missense	SNP	0.240	2	-	ND
DST	p.W5110C	Missense	SNP	0.079	2	-	ND
ETFDH	p.R455T	Missense	SNP	0.123	2	-	ND
FAM166A	p.P25T	Missense	SNP	0.082	2	-	ND
FAM174B	p.S68A	Missense	SNP	0.237	2	-	ND
FDXR	p.H56Q	Missense	SNP	0.156	2	-	ND
GATA2	p.Y260N	Missense	SNP	0.101	2	-	ND
HDAC6	p.S1062P	Missense	SNP	0.089	ND	ND	ND
HDAC9	p.A1024V	Missense	SNP	0.135	2	-	ND
HERC1	p.S1444C	Missense	SNP	0.079	2	-	ND
HMCN1	p.T1674I	Missense	SNP	0.071	2	-	ND
HOXA10	-	-	-	-	0	Del	ND
HOXA11	-	-	-	-	0	Del	ND
HOXA13	-	-	-	-	0	Del	ND
HOXA2	-	-	-	-	0	Del	ND
HOXA3	-	-	-	-	0	Del	ND
HOXA4	-	-	-	-	0	Del	ND
HOXA5	-	-	-	-	0	Del	ND
HOXA6	-	-	-	-	0	Del	ND
HOXA7	-	-	-	-	0	Del	ND
HOXA9	-	-	-	-	0	Del	ND
HOXB4	-	-	-	-	0	Del	ND
HOXB5	-	-	-	-	0	Del	ND
HOXB6	-	-	-	-	0	Del	ND
HOXB7	-	-	-	-	0	Del	ND
HOXB8	-	-	-	-	0	Del	ND
HOXB9	-	-	-	-	0	Del	ND
HOXC10	-	-	-	-	0	Del	ND
HOXC11	-	-	-	-	0	Del	ND
HOXC12	-	-	-	-	0	Del	ND
HOXC13	-	-	-	-	0	Del	ND
HOXC4	-	-	-	-	0	Del	ND
HOXC5	-	-	-	-	0	Del	ND
HOXC6	-	-	-	-	0	Del	ND
HOXC8	-	-	-	-	0	Del	ND
HOXC9	-	-	-	-	0	Del	ND
KDM3A	p.S913C	Missense	SNP	0.122	2	-	ND
KIAA1462	p.S859del	In_Frame_Del	DEL	0.097	ND	ND	ND
KIAA1586	p.S325*	Nonsense	SNP	0.092	2	-	ND
LNX2	p.T220S	Missense	SNP	0.057	2	-	ND
LRRC9	p.N108del	In_Frame_Del	DEL	0.103	2	-	ND
MAP3K12	-	-	-	-	0	Del	ND
MBD5	-	-	-	-	1	Loss	ND
MLXIPL	p.P204S	Missense	SNP	0.065	2	-	ND
MMD	p.Y221C	Missense	SNP	0.121	2	-	ND
MUC13	p.C338S	Missense	SNP	0.123	2	-	ND
MUC17	p.P3410S	Missense	SNP	0.109	2	-	ND
NALCN	p.R93Q	Missense	SNP	0.160	2	-	ND
NCAM1	p.R476W	Missense	SNP	0.076	2	-	ND
NFKBIA	p.W66*	Nonsense	SNP	0.119	2	-	ND
NME7	p.G326E	Missense	SNP	0.104	2	-	ND
NR1D2	p.C159R	Missense	SNP	0.082	2	-	ND
NR2C2	p.S12C	Missense	SNP	0.104	2	-	ND
OR7C2	p.T264P	Missense	SNP	0.132	2	-	ND
OR8H2	p.F32L	Missense	SNP	0.082	2	-	ND
ORC4	-	-	-	-	1	Loss	ND
PCDH15	p.P473Q	Missense	SNP	0.083	2	-	ND
PRPH	-	-	-	-	0	Del	ND
RECK	p.E795Q	Missense	SNP	0.080	2	-	ND
RELN	p.R2040S	Missense	SNP	0.147	2	-	ND
RGPD1	p.C806R	Missense	SNP	0.095	ND	ND	ND
RNF224	p.S110F	Missense	SNP	0.200	2	-	ND
RPS7	p.G186R	Missense	SNP	0.085	2	-	ND
SF3B1	p.R124Q	Missense	SNP	0.140	2	-	ND
SH3RF1	p.A424G	Missense	SNP	0.103	2	-	ND
SLC12A3	p.N781S	Missense	SNP	0.083	2	-	ND
SYMPK	p.D103N	Missense	SNP	0.053	2	-	ND
THOC5	p.E224G	Missense	SNP	0.076	2	-	ND
TMCC2	p.R5K	Missense	SNP	0.060	2	-	ND
TP53	p.X33_splice	Splice_Site	SNP	0.062	2	-	ND
TPRG1	p.R181L	Missense	SNP	0.239	2	-	ND
TRPM6	p.L1083P	Missense	SNP	0.115	2	-	ND
TUBA1A	-	-	-	-	0	Del	ND
TUBA1B	-	-	-	-	0	Del	ND
TUBA1C	-	-	-	-	0	Del	ND
WDR63	p.R735Q	Missense	SNP	0.258	2	-	ND
ZEB2	-	-	-	-	0	Del	ND
ZNF385D	p.G101V	Missense	SNP	0.165	2	-	ND